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  5. Ala_g27247

Ala_g27247 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g27247

Target Alias Description ECC score Gene Family Method Actions
Adi_g036637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62285.t1 ATMBD6, MBD6,... methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G019600.1 ATMBD6, MBD6,... not classified & original description: pacid=50637929... 0.03 OrthoFinder output from all 47 species
Dac_g14846 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06705 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09837 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37533 No alias methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15860 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014899 No alias methylation reader *(MBD5-6) & original description: CDS=290-1816 0.02 OrthoFinder output from all 47 species
Sam_g26548 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g068740.2.1 MBD05, MBD5,... methylation reader (MBD5-6) 0.03 OrthoFinder output from all 47 species
Spa_g49306 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 388 437
No external refs found!