Lfl_g02722 (RPS5B, ATRPS5B)


Aliases : RPS5B, ATRPS5B

Description : component *(uS7) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000775 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000775_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02722

Target Alias Description ECC score Gene Family Method Actions
Ala_g00869 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Als_g37844 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Azfi_s0374.g067208 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ceric.09G021200.1 AML1, RPS5A,... component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ceric.09G021600.1 AML1, RPS5A,... component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Dac_g10905 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ehy_g00502 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
GSVIVT01026328001 RPS5B, ATRPS5B Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 39 species
GSVIVT01033419001 RPS5B, ATRPS5B Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 39 species
Gb_10561 AML1, RPS5A, ATRPS5A component RPS5 of SSU proteome 0.01 OrthoFinder output from all 39 species
Len_g06369 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Pir_g10573 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Pp3c23_6150V3.1 RPS5B, ATRPS5B,... ribosomal protein 5B 0.01 OrthoFinder output from all 39 species
Sam_g00844 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Sam_g25932 No alias component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Spa_g17272 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Spa_g37870 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Tin_g01481 RPS5B, ATRPS5B component *(uS7) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 54 200
No external refs found!