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  5. Lfl_g02690

Lfl_g02690 (HCF164)


Aliases : HCF164

Description : protein involved in cytochrome b6/f complex assembly *(HCF164) & original description: none


Gene families : OG0006010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02690

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00183340 HCF164,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
AT4G37200 HCF164 Thioredoxin superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g01048 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Als_g11520 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Aob_g01003 HCF164 protein involved in cytochrome b6/f complex assembly... 0.07 OrthoFinder output from all 47 species
Aop_g12552 HCF164 protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g043076 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Cre17.g702150 HCF164 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Dac_g03170 HCF164 protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Dcu_g47105 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Dde_g01274 HCF164 protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
GSVIVT01003777001 HCF164 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Gb_14739 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.04 OrthoFinder output from all 47 species
Len_g01077 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Len_g42474 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
MA_10429518g0010 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.03 OrthoFinder output from all 47 species
Mp4g10810.1 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.02 OrthoFinder output from all 47 species
Nbi_g12738 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Ore_g25849 HCF164 protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Pir_g14034 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Sam_g28646 No alias protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Zm00001e011960_P001 HCF164, Zm00001e011960 HCF164 protein involved in cytochrome b6/f complex assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 136 233
No external refs found!