Lfl_g02681 (NFU2, ATCNFU2)

Aliases : NFU2, ATCNFU2

Description : scaffold protein NFU of plastidial SUF system transfer phase & original description: none

Gene families : OG0003751 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003751_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g02681

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00236430	ATCNFU3, NFU3,...	Coenzyme metabolism.iron-sulfur cluster assembly...	0.03	OrthoFinder output from all 47 species
Aop_g64817	NFU2, ATCNFU2	scaffold protein NFU of plastidial SUF system transfer...	0.03	OrthoFinder output from all 47 species
Msp_g04408	NFU2, ATCNFU2	scaffold protein NFU of plastidial SUF system transfer...	0.05	OrthoFinder output from all 47 species
Nbi_g08868	NFU2, ATCNFU2	scaffold protein NFU of plastidial SUF system transfer...	0.02	OrthoFinder output from all 47 species
Ore_g08081	NFU2, ATCNFU2	scaffold protein NFU of plastidial SUF system transfer...	0.03	OrthoFinder output from all 47 species
Ppi_g52825	NFU2, ATCNFU2	scaffold protein NFU of plastidial SUF system transfer...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022872	NFU2, ATCNFU2	scaffold protein NFU of plastidial SUF system transfer...	0.02	OrthoFinder output from all 47 species
Solyc01g103710.4.1	NFU2, ATCNFU2,...	scaffold protein NFU of plastidial SUF system transfer phase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	Interproscan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	IEA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	IEA	Interproscan
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008649	rRNA methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
BP	GO:0031167	rRNA methylation	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0070037	rRNA (pseudouridine) methyltransferase activity	IEP	HCCA
BP	GO:0070475	rRNA base methylation	IEP	HCCA
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001075	NIF_FeS_clus_asmbl_NifU_C	177	239
IPR001075	NIF_FeS_clus_asmbl_NifU_C	96	161

External Links

No external refs found!