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  5. Ala_g25523

Ala_g25523 (CHUP1)


Aliases : CHUP1

Description : motility factor *(CHUP) & original description: none


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g25523

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00113980 evm_27.TU.AmTr_v1... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Adi_g009812 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50900 CHUP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05298 CHUP1 motility factor *(CHUP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12898 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g46340.1 LOC_Os01g46340 regulatory protein (IPGA) of cortical microtubule organisation 0.02 OrthoFinder output from all 47 species
Len_g21976 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32646 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45363 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35111 No alias motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05094 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020303_P001 Zm00001e020303 regulatory protein (IPGA) of cortical microtubule organisation 0.03 OrthoFinder output from all 47 species
Zm00001e038406_P001 Zm00001e038406 Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!