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  5. Ala_g25238

Ala_g25238


Description : not classified & original description: none


Gene families : OG0001585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001585_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g25238

Target Alias Description ECC score Gene Family Method Actions
AT2G47440 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g12121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09974 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g10727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048903 No alias not classified & original description: CDS=127-2157 0.03 OrthoFinder output from all 47 species
Ceric.12G062700.1 Ceric.12G062700 not classified & original description: pacid=50600807... 0.05 OrthoFinder output from all 47 species
MA_10431486g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_176258g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g03965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013323 No alias not classified & original description: CDS=84-1640 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s3471.g028815 No alias not classified & original description: CDS=84-1640 0.04 OrthoFinder output from all 47 species
Solyc06g009670.3.1 Solyc06g009670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g09885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!