Lfl_g02467


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02467

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00050160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00203500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
AMTR_s00075p00159900 evm_27.TU.AmTr_v1... Increased DNA methylation 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00146p00080830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
AT1G05380 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 OrthoFinder output from all 47 species
AT4G14920 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 OrthoFinder output from all 47 species
Adi_g020053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32072 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g29724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25981.t1 Aspi01Gene25981 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53152.t1 Aspi01Gene53152 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010269 No alias not classified & original description: CDS=1215-6422 0.01 OrthoFinder output from all 47 species
Cba_g16245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31776 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.19G070400.1 Ceric.19G070400 not classified & original description: pacid=50576012... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000441.22 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre08.g386000 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g16965 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53630.1 LOC_Os03g53630 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os04g35430.1 LOC_Os04g35430 component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species
LOC_Os07g07690.1 LOC_Os07g07690 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g12071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_139275g0010 No alias PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g13348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g01695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g005170.3.1 Solyc03g005170 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc09g031580.3.1 Solyc09g031580 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc09g065340.3.1 Solyc09g065340 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g04858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005667_P001 Zm00001e005667 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e008083_P001 Zm00001e008083 component IDM1 of ROS1-recruitment complex. PHD finger... 0.03 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e042012_P001 Zm00001e042012 component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 751 801
IPR008395 Agenet-like_dom 14 104
IPR019787 Znf_PHD-finger 823 864
No external refs found!