1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g02462

Lfl_g02462


Description : not classified & original description: none


Gene families : OG0003804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003804_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02462
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00038450 evm_27.TU.AmTr_v1... Brefeldin A-inhibited guanine nucleotide-exchange... 0.03 OrthoFinder output from all 47 species
AT5G27970 No alias ARM repeat superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g12532 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g05143 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aob_g29508 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g13575 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene60178.t1 Aspi01Gene60178 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17539 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.17G014700.1 Ceric.17G014700 not classified & original description: pacid=50618267... 0.06 OrthoFinder output from all 47 species
Cre13.g575250 No alias No description available 0.06 OrthoFinder output from all 47 species
Dcu_g23620 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Dde_g00991 No alias subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021873001 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.1 OrthoFinder output from all 47 species
Gb_33881 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.09 OrthoFinder output from all 47 species
LOC_Os01g56590.1 LOC_Os01g56590 Brefeldin A-inhibited guanine nucleotide-exchange... 0.08 OrthoFinder output from all 47 species
Len_g12955 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10436382g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_734099g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp6g05240.1 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Msp_g14084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37399 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g25289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40937 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g14636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo443671 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.05 OrthoFinder output from all 47 species
Solyc09g018340.2.1 Solyc09g018340 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g018370.4.1 Solyc09g018370 Brefeldin A-inhibited guanine nucleotide-exchange... 0.08 OrthoFinder output from all 47 species
Spa_g21400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20585 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e019674_P001 Zm00001e019674 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e019677_P001 Zm00001e019677 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR015403 Mon2/Sec7/BIG1-like_HDS 842 912
IPR032817 Mon2_C 918 1186
IPR032817 Mon2_C 1482 1652
IPR032691 Mon2/Sec7/BIG1-like_HUS 232 388
IPR032629 DCB_dom 3 171
No external refs found!