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  5. Lfl_g02364

Lfl_g02364 (POLGAMMA2)


Aliases : POLGAMMA2

Description : DNA polymerase *(POP) & original description: none


Gene families : OG0003071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02364

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00102370 POLGAMMA2,... Cell cycle.organelle machineries.DNA replication.DNA... 0.03 OrthoFinder output from all 47 species
AT1G50840 POLGAMMA2 polymerase gamma 2 0.08 OrthoFinder output from all 47 species
Aev_g03409 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g12949 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18706 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G031600.1 POLGAMMA2,... DNA polymerase *(POP) & original description:... 0.05 OrthoFinder output from all 47 species
LOC_Os08g07850.1 POLGAMMA2, LOC_Os08g07850 DNA polymerase (POP) 0.02 OrthoFinder output from all 47 species
Len_g00745 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13674 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16045 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12226 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013658 POLGAMMA2 DNA polymerase *(POP) & original description: CDS=100-3309 0.02 OrthoFinder output from all 47 species
Sam_g16372 No alias DNA polymerase *(POP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06763 POLGAMMA2 DNA polymerase *(POP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e040110_P003 POLGAMMA2, Zm00001e040110 DNA polymerase (POP) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001098 DNA-dir_DNA_pol_A_palm_dom 810 1140
IPR002562 3'-5'_exonuclease_dom 421 587
No external refs found!