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  5. Lfl_g02278

Lfl_g02278


Description : component *(VPS18) of HOPS/CORVET membrane tethering complexes & original description: none


Gene families : OG0004099 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0004099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02278

Target Alias Description ECC score Gene Family Method Actions
Aev_g04175 No alias component *(VPS18) of HOPS/CORVET membrane tethering... 0.06 OrthoFinder output from all 39 species
Ala_g20601 No alias component *(VPS18) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 39 species
Als_g03869 No alias component *(VPS18) of HOPS/CORVET membrane tethering... 0.04 OrthoFinder output from all 39 species
Aob_g17351 No alias component *(VPS18) of HOPS/CORVET membrane tethering... 0.05 OrthoFinder output from all 39 species
Ceric.34G031500.1 Ceric.34G031500 component *(VPS18) of HOPS/CORVET membrane tethering... 0.09 OrthoFinder output from all 39 species
Dcu_g13571 No alias component *(VPS18) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 39 species
Ehy_g04022 No alias component *(VPS18) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 39 species
Len_g00750 No alias component *(VPS18) of HOPS/CORVET membrane tethering... 0.04 OrthoFinder output from all 39 species
Mp4g11360.1 No alias component VPS18 of HOPS/CORVET membrane tethering complexes 0.02 OrthoFinder output from all 39 species
Nbi_g01433 No alias component *(VPS18) of HOPS/CORVET membrane tethering... 0.03 OrthoFinder output from all 39 species
Sacu_v1.1_s0153.g023525 No alias component *(VPS18) of HOPS/CORVET membrane tethering... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 643 790
IPR007810 Pep3_Vps18 291 445
No external refs found!