Ala_g21838


Description : not classified & original description: none


Gene families : OG0001387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001387_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g21838
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00263350 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00025p00237880 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT5G13720 No alias Uncharacterised protein family (UPF0114) 0.04 OrthoFinder output from all 47 species
Adi_g002396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12087 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52268 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g04097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08407.t1 Aspi01Gene08407 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23288.t1 Aspi01Gene23288 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69494.t1 Aspi01Gene69494 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0046.g030133 No alias not classified & original description: CDS=348-1217 0.03 OrthoFinder output from all 47 species
Azfi_s0163.g054217 No alias not classified & original description: CDS=244-1047 0.03 OrthoFinder output from all 47 species
Cba_g03052 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g25205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z152400.1 Ceric.1Z152400 not classified & original description: pacid=50598814... 0.1 OrthoFinder output from all 47 species
Dcu_g00963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01036893001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os06g49640.1 LOC_Os06g49640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g46330.1 LOC_Os07g46330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g00521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426721g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_34822g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g10020.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g27835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g58180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g087680.4.1 Solyc01g087680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e010892_P001 Zm00001e010892 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e013238_P001 Zm00001e013238 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005134 UPF0114 208 346
No external refs found!