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  5. Ala_g21703

Ala_g21703


Description : PLATZ-type transcription factor & original description: none


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g21703
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT2G12646 No alias PLATZ transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g074284 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086526 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47406 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13047 No alias PLATZ-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g11638 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47610 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12441 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26577 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01815 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g55499 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G029500.1 Ceric.39G029500 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g29289 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031929001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Gb_01198 No alias transcription factor (PLATZ) 0.01 OrthoFinder output from all 47 species
LOC_Os02g09070.1 LOC_Os02g09070 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os06g41930.2 LOC_Os06g41930 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os10g42410.3 LOC_Os10g42410 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Len_g56258 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16678 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10310g0010 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
MA_14309g0010 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
MA_49677g0010 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Mp1g07250.1 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Ppi_g63891 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002735 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023339 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g24805 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo412053 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
Smo425306 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Solyc02g036215.1.1 Solyc02g036215 transcription factor (PLATZ) 0.01 OrthoFinder output from all 47 species
Solyc08g005100.3.1 Solyc08g005100 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Zm00001e013748_P001 Zm00001e013748 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Zm00001e013865_P001 Zm00001e013865 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Zm00001e023175_P001 Zm00001e023175 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 57 128
No external refs found!