Ala_g21152


Description : not classified & original description: none


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g21152
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00046p00195170 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g126576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18808 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01006298001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_00786 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g44040.1 LOC_Os08g44040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03790.1 LOC_Os12g03790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g19716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427585g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g23380.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g11760.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g08194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo413798 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc04g076650.2.1 Solyc04g076650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g011270.1.1 Solyc11g011270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g011290.3.1 Solyc11g011290 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003937 IMP cyclohydrolase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR029413 RG-lyase_II 371 440
IPR029411 RG-lyase_III 457 660
IPR010325 Rhamnogal_lyase 20 218
No external refs found!