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  5. Ala_g20987

Ala_g20987


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20987

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00072730 MEF21,... Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Aev_g06657 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46737 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G078100.1 Ceric.13G078100 not classified & original description: pacid=50636136... 0.03 OrthoFinder output from all 47 species
Ceric.20G001900.1 Ceric.20G001900 not classified & original description: pacid=50565969... 0.06 OrthoFinder output from all 47 species
Dac_g35442 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07680 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07723 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g17094 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033863001 No alias RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Lfl_g14546 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g11096 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12706 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021374 No alias not classified & original description: CDS=1-1881 0.02 OrthoFinder output from all 47 species
Smo105729 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.05 OrthoFinder output from all 47 species
Smo110422 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 416 456
IPR002885 Pentatricopeptide_repeat 315 362
IPR002885 Pentatricopeptide_repeat 592 619
IPR002885 Pentatricopeptide_repeat 216 246
IPR002885 Pentatricopeptide_repeat 491 517
IPR002885 Pentatricopeptide_repeat 692 716
IPR002885 Pentatricopeptide_repeat 188 214
IPR002885 Pentatricopeptide_repeat 116 145
IPR002885 Pentatricopeptide_repeat 520 548
IPR002885 Pentatricopeptide_repeat 289 311
IPR002885 Pentatricopeptide_repeat 759 787
IPR002885 Pentatricopeptide_repeat 620 650
No external refs found!