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  5. Ala_g20865

Ala_g20865


Description : not classified & original description: none


Gene families : OG0001437 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20865
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Ala_g38027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21151 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72237.t1 Aspi01Gene72237 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g45026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22738 cog1, RPP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g33761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41073 RRS1, SLH1, ATWRKY52 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 142 384
No external refs found!