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  5. Lfl_g02087

Lfl_g02087


Description : not classified & original description: none


Gene families : OG0006187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02087

Target Alias Description ECC score Gene Family Method Actions
AT5G38840 No alias SMAD/FHA domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g023355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70752 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G004800.1 Ceric.23G004800 not classified & original description: pacid=50610285... 0.03 OrthoFinder output from all 47 species
Cre03.g152450 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g38589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036517001 No alias Protein phosphatase 1 regulatory inhibitor subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os06g16430.1 LOC_Os06g16430 Protein phosphatase 1 regulatory inhibitor subunit... 0.05 OrthoFinder output from all 47 species
Len_g01356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036821_P003 Zm00001e036821 Protein phosphatase 1 regulatory inhibitor subunit... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000253 FHA_dom 125 192
No external refs found!