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  5. Ala_g20827

Ala_g20827 (AAT1, CAT1)


Aliases : AAT1, CAT1

Description : cationic amino acid transporter *(CAT) & original description: none


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20827
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT5G04770 ATCAT6, CAT6 cationic amino acid transporter 6 0.02 OrthoFinder output from all 47 species
Adi_g054487 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Aev_g09519 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Aop_g08528 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53118.t1 ATCAT6, CAT6,... cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08835 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g11160.1 CAT5, LOC_Os01g11160 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43970.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Len_g12660 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
MA_108090g0010 AAT1, CAT1 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Mp5g21920.1 AAT1, CAT1 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Smo104889 AAT1, CAT1 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Zm00001e016491_P001 CAT5, Zm00001e016491 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 71 442
IPR029485 CAT_C 510 560
No external refs found!