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  5. Ala_g20715

Ala_g20715


Description : SSU processome assembly factor *(UTP2/NOP14) & original description: none


Gene families : OG0006351 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006351_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20715

Target Alias Description ECC score Gene Family Method Actions
Aob_g17400 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G019800.1 Ceric.29G019800 SSU processome assembly factor *(UTP2/NOP14) & original... 0.03 OrthoFinder output from all 47 species
Cre06.g260850 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g03088 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.07 OrthoFinder output from all 47 species
Dde_g23879 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.03 OrthoFinder output from all 47 species
Len_g19715 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.03 OrthoFinder output from all 47 species
Pir_g19965 No alias SSU processome assembly factor *(UTP2/NOP14) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0032040 small-subunit processome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007276 Nop14 105 934
IPR007276 Nop14 53 105
No external refs found!