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  5. Ala_g20679

Ala_g20679 (RAD23B, RAD23)


Aliases : RAD23B, RAD23

Description : ubiquitin-proteasome shuttle factor *(RAD23) & original description: none


Gene families : OG0001068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20679

Target Alias Description ECC score Gene Family Method Actions
Adi_g058741 RAD23D ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.21 RAD23D Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011907001 RAD23-3, RAD23C Ubiquitin receptor RAD23c OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os09g24200.1 RAD23D, LOC_Os09g24200 shuttle protein (RAD23) 0.03 OrthoFinder output from all 47 species
Msp_g06770 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.02 OrthoFinder output from all 47 species
Pir_g47590 RAD23A ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR015360 XPC-bd 257 313
IPR015940 UBA 156 194
IPR015940 UBA 340 375
IPR000626 Ubiquitin-like_dom 3 76
No external refs found!