Ala_g20647


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20647

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262470 OTP85 Pentatricopeptide repeat-containing protein At2g02980,... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00204910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g19191,... 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.05 OrthoFinder output from all 47 species
Adi_g004499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g006593 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g014785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036727 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036772 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g053630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g064984 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g066584 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g074726 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g099348 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g100956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g102724 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15138 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g40084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09609 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36436 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g70213 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.05 OrthoFinder output from all 47 species
Dac_g03825 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g03846 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g18287 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g45106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04357 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g04361 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g05381 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g12152 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g13937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17358 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18293 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18498 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g30376 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46118 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46329 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g16458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24053 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27954 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38613 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38625 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18671 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g41187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53593 DOT4 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g61878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015139 No alias not classified & original description: CDS=1-852 0.05 OrthoFinder output from all 47 species
Sam_g40709 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo98426 REME1 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.05 OrthoFinder output from all 47 species
Solyc11g040060.3.1 EMB2758, Solyc11g040060 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Spa_g09909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10971 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18928 EMB2758 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g20184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20297 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21861 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g22684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23932 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g28120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31188 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g39514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45297 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45594 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g52644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55551 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05231 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22109 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g31206 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 69
IPR002885 Pentatricopeptide_repeat 325 371
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 500 524
IPR002885 Pentatricopeptide_repeat 198 220
IPR002885 Pentatricopeptide_repeat 97 119
IPR002885 Pentatricopeptide_repeat 428 458
IPR002885 Pentatricopeptide_repeat 400 420
IPR002885 Pentatricopeptide_repeat 299 322
IPR002885 Pentatricopeptide_repeat 226 255
IPR046848 E_motif 543 605
No external refs found!