Ala_g20579


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20579

Target Alias Description ECC score Gene Family Method Actions
Adi_g002453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g056275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102767 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02274 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g05729 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g06708 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g07187 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g15632 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21594 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g26279 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04431 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06166 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07435 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18203 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18223 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18763 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19265 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g58990 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06180 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30688 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0046.g030124 No alias not classified & original description: CDS=1-2364 0.02 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.05 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.05 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.05 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.05 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.05 OrthoFinder output from all 47 species
Cba_g05328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75131 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G051000.1 Ceric.15G051000 not classified & original description: pacid=50640878... 0.04 OrthoFinder output from all 47 species
Ceric.21G027500.1 Ceric.21G027500 not classified & original description: pacid=50603039... 0.04 OrthoFinder output from all 47 species
Ceric.26G030400.1 Ceric.26G030400 not classified & original description: pacid=50599909... 0.04 OrthoFinder output from all 47 species
Ceric.36G038100.1 Ceric.36G038100 not classified & original description: pacid=50568680... 0.05 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.05 OrthoFinder output from all 47 species
Dac_g09663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g12578 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06184 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32917 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13702 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g14439 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g14904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31613 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12704 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g30080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19941 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02232 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g17674 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g18921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55632 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005758 No alias not classified & original description: CDS=1-2499 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005759 No alias not classified & original description: CDS=1-3063 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009977 No alias not classified & original description: CDS=1-2472 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021475 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2172 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0238.g026585 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2277 0.04 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05155 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08667 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09941 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14554 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29152 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 150 195
IPR002885 Pentatricopeptide_repeat 250 297
IPR002885 Pentatricopeptide_repeat 367 414
IPR002885 Pentatricopeptide_repeat 484 530
IPR002885 Pentatricopeptide_repeat 603 632
IPR002885 Pentatricopeptide_repeat 341 365
IPR002885 Pentatricopeptide_repeat 458 477
No external refs found!