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  5. Ala_g20328

Ala_g20328 (IMPA-1, IMPA1,...)


Aliases : IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA

Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) & original description: none


Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20328

Target Alias Description ECC score Gene Family Method Actions
Adi_g056735 IMPA-3, MOS6, ATIMPALPHA3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48115 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021721.27 IMPA-2 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Cre04.g215850 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Dcu_g09188 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.04 OrthoFinder output from all 47 species
Len_g07411 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Solyc01g060470.3.1 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002652 Importin-a_IBB 12 93
IPR000225 Armadillo 243 270
IPR000225 Armadillo 315 356
IPR000225 Armadillo 105 145
IPR000225 Armadillo 401 439
IPR000225 Armadillo 358 395
IPR000225 Armadillo 189 230
IPR000225 Armadillo 148 186
IPR000225 Armadillo 274 312
IPR032413 Arm_3 456 502
No external refs found!