Ala_g20231 (CYCD1;1, ATCYCD1;1)


Aliases : CYCD1;1, ATCYCD1;1

Description : regulatory protein *(CYCD) of cell cycle & original description: none


Gene families : OG0000395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20231
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00148150 CYCD1;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
AMTR_s00072p00074880 CYCD6;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 OrthoFinder output from all 47 species
AMTR_s00190p00017930 ATCYCD2;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 OrthoFinder output from all 47 species
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.04 OrthoFinder output from all 47 species
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.03 OrthoFinder output from all 47 species
AT4G37630 CYCD5;1 cyclin d5;1 0.04 OrthoFinder output from all 47 species
Ala_g05661 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Als_g01667 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Als_g03626 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Als_g12082 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g13442 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Als_g47164 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Aop_g12696 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g18668 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g31334 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aop_g35995 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aop_g68494 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene22554.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene39255.t1 ATCYCD2;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51365.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene70970.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72259.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0019.g015178 CYCD4;2 not classified & original description: CDS=139-672 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035662 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0250.g060216 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g00886 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g00990 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Cba_g03303 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g16891 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g16892 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ceric.07G090200.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.09G017400.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.10G062700.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G016800.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z120100.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.32G006300.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Dac_g05650 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Dac_g11389 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Dac_g13734 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Dac_g16428 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Dcu_g07032 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dcu_g18290 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dde_g00543 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dde_g01468 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01000125001 CYCD5;1 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 OrthoFinder output from all 47 species
GSVIVT01009432001 CYCD3;3 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 OrthoFinder output from all 47 species
GSVIVT01037810001 CYCD1;1, ATCYCD1;1 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
Gb_34092 CYCD1;1, ATCYCD1;1 cyclin (CYCD) 0.03 OrthoFinder output from all 47 species
LOC_Os06g12980.1 CYCD1;1,... cyclin (CYCD) 0.03 OrthoFinder output from all 47 species
LOC_Os07g37010.1 CYCD6;1, LOC_Os07g37010 cyclin (CYCD) 0.03 OrthoFinder output from all 47 species
LOC_Os09g21450.1 CYCD1;1,... cyclin (CYCD) 0.03 OrthoFinder output from all 47 species
Len_g00488 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Len_g04581 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Len_g55932 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Lfl_g09649 CYCD4;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Lfl_g10565 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Lfl_g13622 ATCYCD2;1, CYCD2;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
MA_10429174g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10429174g0030 CYCD3, CYCD3;1 cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
MA_114375g0010 CYCD1;1, ATCYCD1;1 cyclin (CYCD) 0.07 OrthoFinder output from all 47 species
MA_559426g0020 CYCD3;3 cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
MA_93221g0010 CYCD1;1, ATCYCD1;1 cyclin (CYCD) 0.03 OrthoFinder output from all 47 species
Mp8g17230.1 ATCYCD2;1, CYCD2;1 cyclin (CYCD) 0.03 OrthoFinder output from all 47 species
Msp_g06191 CYCD3;2 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Msp_g06529 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Msp_g08856 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Msp_g10139 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Nbi_g01101 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Nbi_g03493 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g07386 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Nbi_g13351 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g35383 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Nbi_g43541 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ore_g36082 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ore_g36210 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g04462 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ppi_g10385 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Ppi_g11937 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g14272 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010523 ATCYCD2;1, CYCD2;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014749 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020437 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0134.g022297 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023971 No alias regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sam_g06392 No alias regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Sam_g14687 No alias regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Smo15078 CYCD3;3 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 OrthoFinder output from all 47 species
Smo412774 CYCD1;1, ATCYCD1;1 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
Solyc02g064900.3.1 CYCD3;3, Solyc02g064900 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Solyc02g079370.3.1 CYCD6;1, Solyc02g079370 cyclin (CYCD) 0.05 OrthoFinder output from all 47 species
Solyc07g054950.2.1 CYCD6;1, Solyc07g054950 cyclin (CYCD) 0.06 OrthoFinder output from all 47 species
Solyc12g087900.2.1 ATCYCD2;1,... cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Spa_g04266 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g04498 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g06278 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g11128 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Spa_g15040 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Spa_g15041 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Spa_g38227 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Spa_g45652 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g47878 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Tin_g00808 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Tin_g01041 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Tin_g06567 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Zm00001e009441_P003 CYCD3, CYCD3;1,... cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Zm00001e018000_P001 CYCD1;1,... cyclin (CYCD) 0.03 OrthoFinder output from all 47 species
Zm00001e033498_P001 CYCD3;3, Zm00001e033498 cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Zm00001e034405_P005 ATCYCD2;1,... cyclin (CYCD) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 85 213
IPR004367 Cyclin_C-dom 215 309
No external refs found!