Ala_g20195 (PUB15)

Aliases : PUB15

Description : E3 ubiquitin ligase *(SAUL) & original description: none

Gene families : OG0000782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000782_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g20195

Target	Alias	Description	ECC score	Gene Family Method
Ala_g06698	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g00798	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.05G001500.1	PUB44, SAUL1,...	E3 ubiquitin ligase *(SAUL) & original description:...	0.04	OrthoFinder output from all 47 species
MA_82334g0010	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Mp1g26780.1	PUB44, SAUL1, ATPUB44	E3 ubiquitin ligase (PUB)	0.04	OrthoFinder output from all 47 species
Solyc01g068490.4.1	Solyc01g068490	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc01g096200.4.1	Solyc01g096200	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc03g082690.3.1	Solyc03g082690	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Spa_g11352	No alias	E3 ubiquitin ligase *(SAUL) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	HCCA
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	253	320

External Links

No external refs found!