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  5. Ala_g20006

Ala_g20006


Description : not classified & original description: none


Gene families : OG0007426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g20006

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00233710 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Adi_g022403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10109.t1 Aspi01Gene10109 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G008200.1 Ceric.02G008200 not classified & original description: pacid=50584449... 0.05 OrthoFinder output from all 47 species
Dcu_g05000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g22991 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g11981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_140403g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp5g13240.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g19202 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g43562 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g24538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g081420.3.1 Solyc01g081420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e002523_P001 Zm00001e002523 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!