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  5. Ala_g19823

Ala_g19823


Description : histone demethylase *(PKDM8) & original description: none


Gene families : OG0002434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002434_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g19823
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Aop_g20350 No alias histone demethylase *(PKDM8) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11025 No alias histone demethylase *(PKDM8) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01024382001 No alias Protein modification.phosphorylation.TKL kinase... 0.02 OrthoFinder output from all 47 species
Len_g20483 No alias histone demethylase *(PKDM8) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g14396 No alias histone demethylase *(PKDM8) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05487 No alias histone demethylase *(PKDM8) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012910 No alias histone demethylase *(PKDM8) & original description: CDS=45-3857 0.02 OrthoFinder output from all 47 species
Solyc08g076390.3.1 Solyc08g076390 histone demethylase (PKDM8). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 242 365
IPR003349 JmjN 65 98
IPR004198 Znf_C5HC2 457 507
No external refs found!