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  5. Ala_g19209

Ala_g19209 (AT4CL2, 4CL2)


Aliases : AT4CL2, 4CL2

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g19209

Target Alias Description ECC score Gene Family Method Actions
Als_g05666 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024259 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z155100.1 4CL3, Ceric.1Z155100 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Dcu_g38297 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
LOC_Os06g44620.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
MA_109119g0010 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
Nbi_g04314 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Pnu_g07993 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006230 4CL3 not classified & original description: CDS=1-975 0.03 OrthoFinder output from all 47 species
Spa_g09896 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e013798_P002 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Zm00001e016374_P001 ACOS5, Zm00001e016374 acyl-CoA synthetase (ACS5) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 511 586
IPR000873 AMP-dep_Synth/Lig_com 69 502
No external refs found!