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  5. Lfl_g01913

Lfl_g01913


Description : not classified & original description: none


Gene families : OG0002269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01913
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Als_g30409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16456 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g12318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048883 No alias not classified & original description: CDS=392-1735 0.06 OrthoFinder output from all 47 species
Ceric.1Z088200.1 Ceric.1Z088200 not classified & original description: pacid=50573450... 0.1 OrthoFinder output from all 47 species
Dac_g01643 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g12586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g07190.1 LOC_Os12g07190 CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g10616 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08747 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g20411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07739 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g01050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 411 493
IPR000644 CBS_dom 290 330
IPR000644 CBS_dom 67 113
IPR000644 CBS_dom 232 277
IPR000644 CBS_dom 127 172
No external refs found!