MA_10164206g0010


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. CHLORORESPIRATORY REDUCTION22 (CRR22)


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_10164206g0010
Cluster HCCA cluster: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AT1G69350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G13880 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
GSVIVT01015325001 No alias No description available 0.02 Gene family
GSVIVT01017075001 No alias No description available 0.03 Gene family
GSVIVT01018597001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01024870001 No alias No description available 0.02 Gene family
GSVIVT01025569001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01026025001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01026881001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01031266001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01037332001 No alias No description available 0.04 Gene family
LOC_Os06g02200 Os06g0112000 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os08g25280 Os08g0340900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os10g34720 Os10g0488900 No description available 0.03 Gene family
LOC_Os12g30620 Os12g0490100 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_101084g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_104937g0010 No alias No description available 0.03 Gene family
MA_1109g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_11454g0010 No alias No description available 0.02 Gene family
MA_140591g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_193080g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_20599g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
MA_230261g0010 No alias No description available 0.03 Gene family
MA_33151g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_483636g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_501007g0010 No alias No description available 0.02 Gene family
MA_75133g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_77437g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_9258g0010 No alias No description available 0.08 Gene family
MA_961981g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo105776 PACid_15417271 No description available 0.03 Gene family
Smo30579 PACid_15414938 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Smo82024 PACid_15407991 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc02g011680.3.1 Solyc02g011680.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc02g093380.1.1 Solyc02g093380.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Solyc03g082830.2.1 Solyc03g082830.2 No description available 0.02 Gene family
Solyc03g116843.1.1 Solyc03g116843.1 No description available 0.03 Gene family
Solyc05g023900.1.1 Solyc05g023900.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc07g053520.2.1 Solyc07g053520.2 No description available 0.03 Gene family
Solyc09g059580.2.1 Solyc09g059580.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc11g008970.1.1 Solyc11g008970.1 No description available 0.03 Gene family
Solyc11g010220.2.1 Solyc11g010220.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc11g011860.1.1 Solyc11g011860.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d017518 GRMZM2G014977 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d028388 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.03 Gene family
Zm00001d030143 GRMZM2G430710 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d033495 GRMZM5G849971 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d037254 GRMZM2G060337 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d042039 GRMZM2G060536 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d043107 GRMZM2G456114 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d044547 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d050938 GRMZM2G163396 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d051816 GRMZM2G029859 No description available 0.03 Gene family
Zm00001d052794 GRMZM2G140600 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 398 445
IPR002885 Pentatricopeptide_repeat 1 40
IPR002885 Pentatricopeptide_repeat 297 344
IPR002885 Pentatricopeptide_repeat 196 235
IPR002885 Pentatricopeptide_repeat 95 141
IPR032867 DYW_dom 571 695
IPR002885 Pentatricopeptide_repeat 271 295
IPR002885 Pentatricopeptide_repeat 472 496
No external refs found!