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  5. Ala_g18811

Ala_g18811 (PTAC6)


Aliases : PTAC6

Description : cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6) & original description: none


Gene families : OG0007877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g18811

Target Alias Description ECC score Gene Family Method Actions
AT1G21600 PTAC6 plastid transcriptionally active 6 0.03 OrthoFinder output from all 47 species
Adi_g108903 PTAC6 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene31323.t1 PTAC6, Aspi01Gene31323 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.04 OrthoFinder output from all 47 species
Cba_g25899 PTAC6 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.05 OrthoFinder output from all 47 species
Ceric.38G052000.1 PTAC6, Ceric.38G052000 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.04 OrthoFinder output from all 47 species
Lfl_g17801 PTAC6 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.03 OrthoFinder output from all 47 species
Mp8g10030.1 PTAC6 PAP8/TAC6 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Msp_g02426 PTAC6 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.04 OrthoFinder output from all 47 species
Sam_g10869 No alias cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004834 tryptophan synthase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!