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  5. Ala_g18787

Ala_g18787


Description : not classified & original description: none


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g18787

Target Alias Description ECC score Gene Family Method Actions
AT1G22330 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.06 OrthoFinder output from all 47 species
AT1G33470 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 OrthoFinder output from all 47 species
AT1G78260 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
AT3G54770 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Aop_g00568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009045001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01016345001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01027434001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os03g17760.1 LOC_Os03g17760 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g11730.1 LOC_Os06g11730 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g15889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3307g0020 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g01579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003275 No alias not classified & original description: CDS=1-1056 0.03 OrthoFinder output from all 47 species
Solyc04g074310.4.1 Solyc04g074310 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g044470.3.1 Solyc11g044470 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e001294_P001 Zm00001e001294 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e019085_P001 Zm00001e019085 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 101 157
No external refs found!