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  5. Ala_g18676

Ala_g18676


Description : CENH3-recruitment factor *(KNL2) & original description: none


Gene families : OG0002725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002725_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g18676

Target Alias Description ECC score Gene Family Method Actions
AT5G02520 No alias CONTAINS InterPro DOMAIN/s: SANT associated... 0.03 OrthoFinder output from all 47 species
Ehy_g29417 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g28050.1 LOC_Os04g28050 CENH3-recruitment factor (KNL2/Mis18) 0.02 OrthoFinder output from all 47 species
Len_g24207 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18449 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07078 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR015216 SANTA 148 243
No external refs found!