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  5. Ala_g18551

Ala_g18551 (FLN1)


Aliases : FLN1

Description : cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1) & original description: none


Gene families : OG0007280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g18551
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT3G54090 FLN1 fructokinase-like 1 0.04 OrthoFinder output from all 47 species
Aop_g00620 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38593.t1 FLN1, Aspi01Gene38593 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Azfi_s2046.g108873 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Cba_g03197 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Ceric.1Z102700.1 FLN1, Ceric.1Z102700 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.05 OrthoFinder output from all 47 species
LOC_Os01g63220.2 FLN1, LOC_Os01g63220 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Lfl_g15872 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Mp7g17740.1 FLN1 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Ore_g34623 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.02 OrthoFinder output from all 47 species
Pir_g19424 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Sam_g16839 No alias cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Sam_g27490 No alias cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Solyc09g011850.4.1 FLN1, Solyc09g011850 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Zm00001e019266_P002 FLN1, Zm00001e019266 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011611 PfkB_dom 70 412
No external refs found!