AMTR_s00019p00238830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.346

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component


Gene families : OG_01_0001266 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001266_tree ,
OG_02_0000955 (LandPlants) Phylogenetic Tree(s): OG_02_0000955_tree ,
OG_03_0004777 (SeedPlants) Phylogenetic Tree(s): OG_03_0004777_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00238830
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
Mp5g08050.1 No alias component ADA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
Zm00001e040647_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.03 Archaeplastida
AT2G24530 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 LandPlants
LOC_Os12g39090.2 No alias component ADA1 of SAGA transcription co-activator complex 0.01 LandPlants
Smo420782 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 LandPlants
Zm00001e040647_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.03 LandPlants

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 5 332
No external refs found!