Ala_g18491


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g18491

Target Alias Description ECC score Gene Family Method Actions
Adi_g005491 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30878 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g33780 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g29513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03193 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g03749 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16820 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23977 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28726 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02341.t1 Aspi01Gene02341 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14355.t1 Aspi01Gene14355 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0127.g048709 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2400 0.12 OrthoFinder output from all 47 species
Ceric.12G029700.1 Ceric.12G029700 not classified & original description: pacid=50601859... 0.04 OrthoFinder output from all 47 species
Ceric.1Z131300.1 CRR22, Ceric.1Z131300 not classified & original description: pacid=50639026... 0.04 OrthoFinder output from all 47 species
Dcu_g08372 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g23529 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g17530.2 LOC_Os11g17530 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
Len_g02904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04309 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g12521 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18579 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18962 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44806 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g45180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23774 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29548 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37474 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13229 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57343 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30304 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06887 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g09327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53555 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63206 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019261 No alias not classified & original description: CDS=1-3048 0.05 OrthoFinder output from all 47 species
Sam_g29285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo432405 No alias No description available 0.08 OrthoFinder output from all 47 species
Spa_g14171 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g16206 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g54647 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04965 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g07829 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g27779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011875_P001 OTP85, Zm00001e011875 RNA editing factor (OTP85) 0.08 OrthoFinder output from all 47 species
Zm00001e027846_P001 CRR21, Zm00001e027846 RNA editing factor (CRR21) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 638 660
IPR002885 Pentatricopeptide_repeat 334 357
IPR002885 Pentatricopeptide_repeat 129 150
IPR002885 Pentatricopeptide_repeat 435 455
IPR002885 Pentatricopeptide_repeat 742 764
IPR002885 Pentatricopeptide_repeat 537 560
IPR002885 Pentatricopeptide_repeat 667 711
IPR002885 Pentatricopeptide_repeat 563 609
IPR002885 Pentatricopeptide_repeat 461 507
IPR002885 Pentatricopeptide_repeat 257 304
IPR002885 Pentatricopeptide_repeat 154 201
IPR002885 Pentatricopeptide_repeat 362 405
No external refs found!