1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g01844

Lfl_g01844


Description : not classified & original description: none


Gene families : OG0007479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007479_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01844

Target Alias Description ECC score Gene Family Method Actions
Ala_g02259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0472.g072954 No alias not classified & original description: CDS=1-2022 0.04 OrthoFinder output from all 47 species
Cba_g03998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G055900.1 Ceric.04G055900 not classified & original description: pacid=50630473... 0.03 OrthoFinder output from all 47 species
MA_14851g0010 No alias F-box protein At5g39450 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sam_g24843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021899_P001 Zm00001e021899 F-box protein At5g39450 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 45 85
No external refs found!