Cre11.g468450


Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.CEN centrin component


Gene families : OG_01_0000031 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000031_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre11.g468450
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00127800 evm_27.TU.AmTr_v1... Calmodulin OS=Solanum lycopersicum 0.03 Archaeplastida
AT1G05990 RHS1 EF hand calcium-binding protein family 0.03 Archaeplastida
AT1G12310 No alias Calcium-binding EF-hand family protein 0.04 Archaeplastida
AT1G24620 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
AT1G66410 ACAM-4, CAM4 calmodulin 4 0.01 Archaeplastida
AT2G27030 ACAM-2, CAM5 calmodulin 5 0.02 Archaeplastida
AT3G43810 CAM7 calmodulin 7 0.01 Archaeplastida
AT3G51920 ATCML9, CAM9, CML9 calmodulin 9 0.02 Archaeplastida
AT4G12860 UNE14 EF hand calcium-binding protein family 0.02 Archaeplastida
AT5G21274 ACAM-6, CAM6 calmodulin 6 0.02 Archaeplastida
AT5G37780 TCH1, CAM1, ACAM-1 calmodulin 1 0.02 Archaeplastida
Cpa|evm.model.tig00000692.65 No alias Calmodulin-2 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
Cpa|evm.model.tig00021435.47 No alias Calmodulin OS=Mougeotia scalaris 0.02 Archaeplastida
Cpa|evm.model.tig00021720.13 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
Cre06.g283550 No alias Caltractin OS=Scherffelia dubia 0.04 Archaeplastida
GSVIVT01000380001 No alias Calmodulin OS=Solanum lycopersicum 0.02 Archaeplastida
GSVIVT01004914001 No alias Probable calcium-binding protein CML13 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01025831001 No alias Calmodulin OS=Lilium longiflorum 0.01 Archaeplastida
GSVIVT01037418001 No alias Calmodulin-related protein OS=Petunia hybrida 0.02 Archaeplastida
Gb_13868 No alias Probable calcium-binding protein CML43 OS=Arabidopsis... 0.01 Archaeplastida
Gb_20553 No alias Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 248.0) 0.02 Archaeplastida
LOC_Os01g17190.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
LOC_Os02g39380.1 No alias Probable calcium-binding protein CML17 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os03g20370.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
LOC_Os03g53200.1 No alias Calmodulin-like protein 4 OS=Oryza sativa subsp.... 0.01 Archaeplastida
LOC_Os05g41210.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.05 Archaeplastida
LOC_Os07g48780.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
LOC_Os08g04890.1 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.01 Archaeplastida
MA_103558g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_10429336g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
MA_616616g0010 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 Archaeplastida
MA_66144g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.01 Archaeplastida
Mp1g00710.1 No alias DNA repair protein (CEN2). centrin component CEN of... 0.02 Archaeplastida
Mp1g22210.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp6g20440.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.04 Archaeplastida
Pp3c13_2440V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c24_2030V3.1 No alias calmodulin 5 0.01 Archaeplastida
Smo141966 No alias Calmodulin-1 OS=Oryza sativa subsp. indica 0.02 Archaeplastida
Solyc02g067220.4.1 No alias no description available(sp|q93z27|cml46_arath : 83.2) 0.02 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 Archaeplastida
Solyc04g008000.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.01 Archaeplastida
Solyc06g150132.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc09g055880.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g081170.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
Solyc11g072270.3.1 No alias Probable calcium-binding protein CML13 OS=Arabidopsis... 0.05 Archaeplastida
Solyc12g099990.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Zm00001e007722_P001 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e009213_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.01 Archaeplastida
Zm00001e010998_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Zm00001e017290_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.05 Archaeplastida
Zm00001e027331_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.05 Archaeplastida
Zm00001e031996_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Zm00001e038252_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e039793_P001 No alias Probable calcium-binding protein CML28 OS=Oryza sativa... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 28 90
IPR002048 EF_hand_dom 101 164
No external refs found!