Aliases : HTA7
Description : histone *(H2A) & original description: none
Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g003557 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g011160 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g011169 | HTA7 | histone *(H2A) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Adi_g011320 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Adi_g011321 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g034181 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g047730 | HTA7 | histone *(H2A) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Adi_g070713 | HTA7 | histone *(H2A) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Adi_g078410 | HTA13 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g082134 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g086789 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g08544 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g11673 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aop_g01994 | HTA7 | histone *(H2A) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Aop_g09992 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aop_g09993 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Aop_g54113 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene06356.t1 | HTA6, Aspi01Gene06356 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene10197.t1 | RAT5, HTA1,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene23033.t1 | HTA6, Aspi01Gene23033 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene25411.t1 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Aspi01Gene41901.t1 | RAT5, HTA1,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene45042.t1 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene48036.t1 | HTA7, Aspi01Gene48036 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g07967 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.25G059300.1 | GAMMA-H2AX,... | histone *(H2A) & original description: pacid=50594046... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.37G036600.1 | HTA7, Ceric.37G036600 | histone *(H2A) & original description: pacid=50616072... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g06100 | HTA6 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dac_g13937 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dac_g34896 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Dcu_g05168 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g12969 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01011034001 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.04 | OrthoFinder output from all 47 species | |
Gb_07185 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
Gb_39944 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g31800.1 | HTA12, LOC_Os01g31800 | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g17100.1 | HTA12, LOC_Os03g17100 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g02300.1 | HTA12, LOC_Os05g02300 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
Len_g03984 | HTA7 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g05644 | RAT5, HTA1, ATHTA1 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g14652 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g20304 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Len_g55104 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g39719 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g39892 | HTA10 | histone *(H2A) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
MA_74667g0010 | HTA7 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
MA_94328g0020 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
MA_962778g0010 | HTA7 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
Mp3g02370.1 | HTA13 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g11191 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Msp_g29485 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Nbi_g00069 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Nbi_g11307 | HTA10 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g28966 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g29875 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03457 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Ppi_g62733 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g10764 | No alias | histone *(H2A) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Sam_g10765 | No alias | histone *(H2A) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Sam_g21361 | No alias | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g29426 | No alias | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g48398 | No alias | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g03104 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.15 | OrthoFinder output from all 47 species | |
Spa_g03105 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.15 | OrthoFinder output from all 47 species | |
Spa_g03519 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Spa_g03522 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.15 | OrthoFinder output from all 47 species | |
Spa_g29751 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g34289 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g45415 | HTA6 | histone *(H2A) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Spa_g45749 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g46345 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Tin_g04849 | HTA6 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g11136 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.12 | OrthoFinder output from all 47 species | |
Tin_g12865 | HTA7 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g14389 | HTA7 | histone *(H2A) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Tin_g42031 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e034815_P001 | HTA12, Zm00001e034815 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0032392 | DNA geometric change | IEP | HCCA |
BP | GO:0032508 | DNA duplex unwinding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
No external refs found! |