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  5. Lfl_g01771

Lfl_g01771


Description : component *(uS9m) of small mitoribosomal-subunit proteome & original description: none


Gene families : OG0002624 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002624_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01771

Target Alias Description ECC score Gene Family Method Actions
AT3G49080 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.02 OrthoFinder output from all 47 species
Dcu_g01558 No alias component *(uS9m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g12612 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_10434552g0010 No alias component mtRPS9 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Ppi_g07504 No alias component *(uS9m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Spa_g11562 No alias component *(uS9m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Zm00001e035755_P001 Zm00001e035755 component mtRPS9 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 322 442
No external refs found!