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  5. Ala_g17546

Ala_g17546 (OTP85)


Aliases : OTP85

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g17546

Target Alias Description ECC score Gene Family Method Actions
Aob_g27256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20191 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001614 No alias not classified & original description: CDS=1-2595 0.06 OrthoFinder output from all 47 species
Azfi_s0068.g036252 No alias not classified & original description: CDS=1-1656 0.05 OrthoFinder output from all 47 species
Azfi_s0349.g066524 No alias ssDNA-binding protein *(OSB) & original description: CDS=117-392 0.06 OrthoFinder output from all 47 species
Azfi_s0383.g067429 No alias not classified & original description: CDS=1-1644 0.06 OrthoFinder output from all 47 species
Cba_g29644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G049800.1 Ceric.17G049800 not classified & original description: pacid=50617439... 0.07 OrthoFinder output from all 47 species
Ceric.29G053300.1 Ceric.29G053300 not classified & original description: pacid=50624372... 0.06 OrthoFinder output from all 47 species
Cre12.g483720 No alias Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
Dcu_g08475 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45838 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_29557 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
LOC_Os04g14450.1 LOC_Os04g14450 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
Len_g18855 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g28341 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g34904 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15400 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g46685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g42477 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g48925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo26993 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.08 OrthoFinder output from all 47 species
Tin_g09309 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e040855_P003 Zm00001e040855 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 152 198
IPR002885 Pentatricopeptide_repeat 227 253
IPR002885 Pentatricopeptide_repeat 92 118
No external refs found!