Lfl_g01688


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01688

Target Alias Description ECC score Gene Family Method Actions
AT1G04990 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 OrthoFinder output from all 47 species
AT1G29560 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 OrthoFinder output from all 47 species
AT2G32930 ZFN2 zinc finger nuclease 2 0.03 OrthoFinder output from all 47 species
Ala_g13666 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G043900.1 ZFN1, Ceric.34G043900 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dcu_g13224 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dde_g04320 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
MA_61530g0010 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g05812 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000536 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016888 HUA1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Spa_g20455 HUA1 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Zm00001e008903_P005 ZFN1, Zm00001e008903 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 122 146
IPR000571 Znf_CCCH 326 350
IPR000571 Znf_CCCH 73 97
IPR000571 Znf_CCCH 24 47
IPR000571 Znf_CCCH 282 307
No external refs found!