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  5. Ala_g16634

Ala_g16634


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g16634

Target Alias Description ECC score Gene Family Method Actions
Adi_g021711 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15632 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30688 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008666 No alias not classified & original description: CDS=1-2997 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0219.g058598 No alias not classified & original description: CDS=1-1215 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g04021 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07618 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67449 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67874 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G030900.1 CRR22, Ceric.03G030900 not classified & original description: pacid=50573050... 0.04 OrthoFinder output from all 47 species
Ceric.11G019200.1 Ceric.11G019200 not classified & original description: pacid=50596467... 0.03 OrthoFinder output from all 47 species
Ceric.11G090500.1 Ceric.11G090500 not classified & original description: pacid=50596019... 0.03 OrthoFinder output from all 47 species
Ceric.11G091700.1 Ceric.11G091700 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G076500.1 Ceric.14G076500 not classified & original description: pacid=50633826... 0.04 OrthoFinder output from all 47 species
Ceric.15G076300.1 Ceric.15G076300 not classified & original description: pacid=50639367... 0.03 OrthoFinder output from all 47 species
Ceric.18G062200.1 Ceric.18G062200 not classified & original description: pacid=50622099... 0.03 OrthoFinder output from all 47 species
Ceric.21G027500.1 Ceric.21G027500 not classified & original description: pacid=50603039... 0.03 OrthoFinder output from all 47 species
Ceric.23G032200.1 Ceric.23G032200 not classified & original description: pacid=50610511... 0.03 OrthoFinder output from all 47 species
Ceric.29G083700.1 Ceric.29G083700 not classified & original description: pacid=50625623... 0.03 OrthoFinder output from all 47 species
Ceric.32G031800.1 Ceric.32G031800 not classified & original description: pacid=50597829... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Len_g09290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14118 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007662 CRR22 not classified & original description: CDS=517-2514 0.04 OrthoFinder output from all 47 species
Sam_g23060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18900 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 643 672
IPR002885 Pentatricopeptide_repeat 1009 1035
IPR002885 Pentatricopeptide_repeat 727 751
IPR002885 Pentatricopeptide_repeat 410 440
IPR002885 Pentatricopeptide_repeat 1047 1070
IPR002885 Pentatricopeptide_repeat 615 641
IPR002885 Pentatricopeptide_repeat 526 554
IPR002885 Pentatricopeptide_repeat 190 236
IPR002885 Pentatricopeptide_repeat 754 801
IPR002885 Pentatricopeptide_repeat 290 337
IPR002885 Pentatricopeptide_repeat 871 907
No external refs found!