Ala_g16431


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g16431

Target Alias Description ECC score Gene Family Method Actions
AT3G61170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g004402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12178 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21042 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24238 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31179 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g31194 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33357 OTP86 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g35853 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36028 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g18705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16217 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27035 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G018600.1 Ceric.01G018600 not classified & original description: pacid=50592052... 0.04 OrthoFinder output from all 47 species
Ceric.02G047700.1 Ceric.02G047700 not classified & original description: pacid=50586056... 0.04 OrthoFinder output from all 47 species
Ceric.06G014300.1 Ceric.06G014300 not classified & original description: pacid=50620883... 0.04 OrthoFinder output from all 47 species
Ceric.10G046000.1 CRR22, Ceric.10G046000 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.03 OrthoFinder output from all 47 species
Ceric.1Z201600.1 Ceric.1Z201600 not classified & original description: pacid=50565787... 0.06 OrthoFinder output from all 47 species
Ceric.20G015100.1 Ceric.20G015100 not classified & original description: pacid=50567311... 0.05 OrthoFinder output from all 47 species
Ceric.20G040800.1 OTP86, Ceric.20G040800 not classified & original description: pacid=50566943... 0.04 OrthoFinder output from all 47 species
Ceric.20G086100.1 Ceric.20G086100 not classified & original description: pacid=50566462... 0.05 OrthoFinder output from all 47 species
Ceric.25G011600.1 Ceric.25G011600 not classified & original description: pacid=50594012... 0.03 OrthoFinder output from all 47 species
Ceric.25G036300.1 Ceric.25G036300 not classified & original description: pacid=50594016... 0.05 OrthoFinder output from all 47 species
Ceric.28G015100.1 Ceric.28G015100 not classified & original description: pacid=50570923... 0.05 OrthoFinder output from all 47 species
Ceric.29G081800.1 VAC1, ECB2,... not classified & original description: pacid=50624309... 0.04 OrthoFinder output from all 47 species
Ceric.33G060200.1 Ceric.33G060200 not classified & original description: pacid=50607485... 0.03 OrthoFinder output from all 47 species
Dac_g05525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18942 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05435 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18031 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26566 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Msp_g28533 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33498 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g42692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30413 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57072 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g26606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02061 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g07082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 388 433
IPR002885 Pentatricopeptide_repeat 489 536
IPR002885 Pentatricopeptide_repeat 80 127
IPR002885 Pentatricopeptide_repeat 183 230
IPR002885 Pentatricopeptide_repeat 285 331
IPR002885 Pentatricopeptide_repeat 563 585
No external refs found!