Ala_g16048 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g16048

Target	Alias	Description	ECC score	Gene Family Method
AT2G39480	PGP6	P-glycoprotein 6	0.02	OrthoFinder output from all 47 species
AT3G28860	ABCB19,...	ATP binding cassette subfamily B19	0.02	OrthoFinder output from all 47 species
AT4G18050	PGP9	P-glycoprotein 9	0.03	OrthoFinder output from all 47 species
Adi_g058585	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g105656	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g17861	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g19030	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g33802	No alias	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g42964	PGP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene08455.t1	PGP11, Aspi01Gene08455	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene28299.t1	Aspi01Gene28299	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene52651.t1	PGP2, Aspi01Gene52651	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0002.g001326	PGP20	subfamily ABCB transporter & original description: CDS=439-4584	0.02	OrthoFinder output from all 47 species
Azfi_s0039.g026389	PGP11	subfamily ABCB transporter & original description: CDS=323-4378	0.02	OrthoFinder output from all 47 species
Azfi_s2496.g111845	ABCB19,...	subfamily ABCB transporter & original description: CDS=142-3066	0.02	OrthoFinder output from all 47 species
Ceric.02G084300.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.05	OrthoFinder output from all 47 species
Dac_g45466	PGP11	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g13758	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Gb_08615	PGP11	ABC transporter B family member 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os01g34970.1	PGP11, LOC_Os01g34970	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
LOC_Os01g50160.1	PGP11, LOC_Os01g50160	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os02g09720.1	LOC_Os02g09720	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os03g17180.1	PGP20, LOC_Os03g17180	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Len_g56555	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g41280	PGP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_102299g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_10432169g0010	PGP11	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_8519205g0010	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_9253g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_93218g0020	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Nbi_g02494	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g37290	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42673	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Spa_g03247	ATPGP4, PGP4, ABCB4, MDR4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g06203	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g18839	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g08424	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	211	358
IPR003439	ABC_transporter-like_ATP-bd	864	1013
IPR011527	ABC1_TM_dom	529	792
IPR011527	ABC1_TM_dom	2	137

External Links

No external refs found!

Ala_g16048 (ABCB19, ATABCB19,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation