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  5. Ala_g15869

Ala_g15869 (HST, HST1)


Aliases : HST, HST1

Description : nucleocytoplasmic transport karyopherin *(XPO5) & original description: none


Gene families : OG0003900 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003900_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g15869

Target Alias Description ECC score Gene Family Method Actions
AT3G05040 HST, HST1 ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g105485 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.02 OrthoFinder output from all 47 species
Ceric.1Z160000.1 HST, HST1, Ceric.1Z160000 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000523.41 No alias Protein HASTY 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01021908001 HST, HST1 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
MA_10429173g0010 HST, HST1 Protein HASTY 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10436866g0010 HST, HST1 Protein HASTY 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_39570g0010 HST, HST1 Protein HASTY 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g06561 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.04 OrthoFinder output from all 47 species
Sam_g29681 No alias nucleocytoplasmic transport karyopherin *(XPO5) &... 0.02 OrthoFinder output from all 47 species
Spa_g17310 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.03 OrthoFinder output from all 47 species
Zm00001e026304_P001 HST, HST1, Zm00001e026304 miRNA nuclear export factor (HASTY). XPO5... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013598 Exportin-1/Importin-b-like 106 265
IPR045478 Exportin-5_C 310 1149
No external refs found!