Ala_g15633 (CPSF30, ATCPSF30)

Aliases : CPSF30, ATCPSF30

Description : component *(CPSF30/Yth1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & original description: none

Gene families : OG0003202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003202_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g15633

Target	Alias	Description	ECC score	Gene Family Method
Ehy_g23212	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os06g46400.1	CPSF30,...	component CPSF30/Yth1 of Cleavage and Polyadenylation...	0.04	OrthoFinder output from all 47 species
Mp6g15200.1	CPSF30, ATCPSF30	component CPSF30/Yth1 of Cleavage and Polyadenylation...	0.02	OrthoFinder output from all 47 species
Solyc02g021760.3.1	CPSF30,...	component CPSF30/Yth1 of Cleavage and Polyadenylation...	0.02	OrthoFinder output from all 47 species
Solyc02g070240.3.1	CPSF30,...	component CPSF30/Yth1 of Cleavage and Polyadenylation...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007275	YTH_domain	337	390
IPR007275	YTH_domain	258	320

External Links

No external refs found!