1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g01476

Lfl_g01476


Description : translation elongation factor *(EF-Tu) & original description: none


Gene families : OG0001305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g01476

Target Alias Description ECC score Gene Family Method Actions
AT4G02930 No alias GTP binding Elongation factor Tu family protein 0.03 OrthoFinder output from all 47 species
Aop_g11193 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Cba_g07152 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G051100.1 Ceric.33G051100 translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.40 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Cre06.g259150 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dcu_g01379 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
LOC_Os03g63410.1 LOC_Os03g63410 EF-Tu translation elongation factor 0.05 OrthoFinder output from all 47 species
MA_58335g0010 No alias EF-Tu translation elongation factor 0.02 OrthoFinder output from all 47 species
Mp1g14750.1 No alias EF-Tu translation elongation factor 0.03 OrthoFinder output from all 47 species
Ore_g05800 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Smo153081 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Solyc06g008940.4.1 Solyc06g008940 EF-Tu translation elongation factor 0.05 OrthoFinder output from all 47 species
Solyc09g073000.3.1 Solyc09g073000 EF-Tu translation elongation factor 0.06 OrthoFinder output from all 47 species
Tin_g06040 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e006373_P001 Zm00001e006373 EF-Tu translation elongation factor 0.03 OrthoFinder output from all 47 species
Zm00001e011649_P001 Zm00001e011649 EF-Tu translation elongation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 360 453
IPR000795 T_Tr_GTP-bd_dom 68 261
IPR004161 EFTu-like_2 285 354
No external refs found!