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  5. Ala_g14693

Ala_g14693 (DML1, ROS1)


Aliases : DML1, ROS1

Description : methylcytosine-specific DNA glycosylase *(ROS1) & original description: none


Gene families : OG0001282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g14693

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00215000 DME,... DNA damage response.DNA repair mechanisms.base excision... 0.03 OrthoFinder output from all 47 species
AT2G36490 DML1, ROS1 demeter-like 1 0.03 OrthoFinder output from all 47 species
AT3G10010 DML2 demeter-like 2 0.03 OrthoFinder output from all 47 species
Azfi_s0268.g061061 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01033777001 DML1, ROS1 DNA damage response.DNA repair mechanisms.base excision... 0.03 OrthoFinder output from all 47 species
LOC_Os02g29380.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1) 0.04 OrthoFinder output from all 47 species
LOC_Os05g37350.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1).... 0.04 OrthoFinder output from all 47 species
Ore_g38428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018728 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.04 OrthoFinder output from all 47 species
Solyc03g123440.3.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1) 0.02 OrthoFinder output from all 47 species
Solyc10g083630.2.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1).... 0.04 OrthoFinder output from all 47 species
Zm00001e007900_P001 Zm00001e007900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014584_P001 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR028925 RRM_DME 1605 1705
No external refs found!