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  5. Ala_g14658

Ala_g14658


Description : component *(TFB1) of TFIIh basal transcription factor complex & original description: none


Gene families : OG0004762 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004762_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g14658
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cre10.g466550 No alias RNA biosynthesis.transcriptional activation.BSD... 0.01 OrthoFinder output from all 47 species
LOC_Os08g25060.1 LOC_Os08g25060 subunit TFB1 of multifunctional TFIIh complex. component... 0.02 OrthoFinder output from all 47 species
Ore_g33117 No alias component *(TFB1) of TFIIh basal transcription factor... 0.06 OrthoFinder output from all 47 species
Solyc10g005900.3.1 Solyc10g005900 subunit TFB1 of multifunctional TFIIh complex. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR005607 BSD_dom 208 257
IPR013876 TFIIH_BTF_p62_N 21 97
No external refs found!