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  5. Ala_g14642

Ala_g14642 (XDH2, ATXDH2)


Aliases : XDH2, ATXDH2

Description : EC_1.17 oxidoreductase acting on CH or CH2 group & original description: none


Gene families : OG0000453 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g14642

Target Alias Description ECC score Gene Family Method Actions
AT4G34890 ATXDH1, XDH1 xanthine dehydrogenase 1 0.03 OrthoFinder output from all 47 species
Adi_g014198 ATXDH1, XDH1 EC_1.17 oxidoreductase acting on CH or CH2 group &... 0.03 OrthoFinder output from all 47 species
Adi_g055439 ATXDH1, XDH1 EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.05 OrthoFinder output from all 47 species
Aob_g06751 ATXDH1, XDH1 EC_1.17 oxidoreductase acting on CH or CH2 group &... 0.03 OrthoFinder output from all 47 species
Aob_g20994 At-AO3, AAO3,... EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.04 OrthoFinder output from all 47 species
Ehy_g14830 ATAO-4, ATAO2, AAO4, AO4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13836 AO3, AAO2,... EC_1.2 oxidoreductase acting on aldehyde or oxo group of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR046867 AldOxase/xan_DH_MoCoBD2 1021 1293
IPR000674 Ald_Oxase/Xan_DH_a/b 633 740
IPR008274 AldOxase/xan_DH_MoCoBD1 762 996
IPR002346 Mopterin_DH_FAD-bd 285 460
IPR002888 2Fe-2S-bd 93 167
IPR005107 CO_DH_flav_C 469 572
IPR001041 2Fe-2S_ferredoxin-type 16 83
No external refs found!